Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 507.1169 134
P07584 Xanthopappin A 172.0347 173.0429 134
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 538.1922 134
P20347 Girolline 190.0621 191.0692 134
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 111.1160 134
P23823 Tubastrindole G 509.2142 510.2207 134
P26981 Leandreanin B 774.2748 775.2841 134
P30845 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2877 553.2929 134
P32272 8-Azaguanine 152.0460 153.0536 134
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 681.2956 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G324300 GmCSyGT1 NA 42
Glyma.07G011100 hypothetical protein AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein 42
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 42
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 42
Glyma.07G093800 hypothetical protein NA 42
Glyma.07G223600 hypothetical protein NA 42
Glyma.08G227900 hypothetical protein NA 42
Glyma.10G038200 hypothetical protein NA 42
Glyma.12G018000 hypothetical protein NA 42
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 42