Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P26418	Antibiotic 273a1alpha	1112.3282	1113.3409	231
P30811		767.2566	768.2643	231
P04078		311.5769	312.5829	230
P14825	9R-hydroxy-2E,4E-decadienoic acid	184.1086	185.1164	230
P17592		175.1437	176.1505	230
P31714	4,4'-Dihydroxystilbene	212.0832	213.0898	230
P20017		343.2428	344.2506	229
P21903	Triptregeline H	611.2282	612.2377	229
P31991	Irroratin A	378.2030	379.2088	229
P26216	trans-2-Enoyl-OPC6-CoA	1013.2870	1014.2977	228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.06G324300	GmCSyGT1		NA	42
Glyma.07G011100		hypothetical protein	AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein	42
Glyma.07G058600		hypothetical protein	AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein	42
Glyma.07G058700		hypothetical protein	AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein	42
Glyma.07G093800		hypothetical protein	NA	42
Glyma.07G223600		hypothetical protein	NA	42
Glyma.08G227900		hypothetical protein	NA	42
Glyma.10G038200		hypothetical protein	NA	42
Glyma.12G018000		hypothetical protein	NA	42
Glyma.12G049500		hypothetical protein	AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein	42