Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 531.1460 147
P10107 Hygrocin B 507.1872 508.1911 146
P11442 Bunazosin 373.2181 374.2261 146
P15842 505.1794 506.1878 146
P20514 Pentacarboxyl porphyrinogen III 700.2711 701.2769 146
P21007 Notoamide S 435.2469 436.2553 146
P22172 593.9022 594.9029 146
P25341 Trifenmorph 329.1779 330.1831 146
P30652 Isonigerone 570.1436 571.1515 146
P31493 Clocinizine 402.1832 403.1902 146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G324300 GmCSyGT1 NA 42
Glyma.07G011100 hypothetical protein AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein 42
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 42
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 42
Glyma.07G093800 hypothetical protein NA 42
Glyma.07G223600 hypothetical protein NA 42
Glyma.08G227900 hypothetical protein NA 42
Glyma.10G038200 hypothetical protein NA 42
Glyma.12G018000 hypothetical protein NA 42
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 42