Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55161 1-dimethylarsinoyl-decane 262.1259 263.1321 —
P55163 2-Propylphenol 136.0890 409.2738 —
P55165 601.4141 602.4200 —
P55167 17-(4-Hydroxyphenyl)heptadecanoyl adenylate 691.3377 692.3438 —
P55169 265.2467 266.2533 —
P55170 12R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 503.2855 504.2909 —
P55171 Phyllanthusmin C 512.1315 513.1352 —
P55175 Aspergilone A 386.1888 387.1962 —
P55176 2-Benzyl-aminoethanol 151.0991 454.3046 —
P55179 Chatferin 336.2268 337.2331 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G324300 GmCSyGT1 NA 42
Glyma.07G011100 hypothetical protein AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein 42
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 42
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 42
Glyma.07G093800 hypothetical protein NA 42
Glyma.07G223600 hypothetical protein NA 42
Glyma.08G227900 hypothetical protein NA 42
Glyma.10G038200 hypothetical protein NA 42
Glyma.12G018000 hypothetical protein NA 42
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 42