Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P19549 Difloxacin 399.1411 400.1484 192
P21953 Nordenletin 556.2090 557.2123 192
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 1122.5740 192
P25100 762.2022 763.2058 192
P26566 703.2717 704.2750 192
P32490 Juncin K 706.3299 707.3398 192
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 370.1469 192
P35251 Mycothiazole-4,19-diol 438.2197 439.2304 192
P41427 Cadensin B 482.1216 483.1254 192
P42403 Artomunoxanthentrione epoxide 462.1286 463.1370 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G051500 hypothetical protein AT3G06960:PDE320:pigment defective 320 43
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 43
Glyma.16G051900 hypothetical protein NA 43
Glyma.16G172800 hypothetical protein AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein 43
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 43
Glyma.20G152300 hypothetical protein NA 43
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 42
Glyma.03G173600 hypothetical protein AT3G53570:FC1:serine/threonine-protein kinase AFC1 42
Glyma.03G204300 hypothetical protein AT3G52370:FLA15:FASCICLIN-like arabinogalactan protein 15__AT2G35860:FLA16:FASCICLIN-like arabinogalactan protein 16 42
Glyma.06G313600 hypothetical protein AT5G13750:ZIFL1:zinc induced facilitator-like 1 42