Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P37887 | Starch acetate | 306.0940 | 307.1009 | 207 |
| P41794 | Xylogranatin A | 642.2652 | 643.2735 | 207 |
| P50979 | 261.2154 | 262.2224 | 207 | |
| P55337 | Fagopyrine | 670.2326 | 671.2406 | 207 |
| P18076 | (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine | 320.0919 | 321.0978 | 206 |
| P24832 | Stercobilin | 594.3421 | 595.3505 | 206 |
| P37255 | (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid | 454.3399 | 455.3477 | 206 |
| P08444 | (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate | 155.0591 | 156.0664 | 205 |
| P13362 | Quercetin 3-coumaroyl-triglucoside | 488.1517 | 489.1566 | 205 |
| P15731 | HDMBOA-Glc | 387.1176 | 388.1224 | 205 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.09G051500 | hypothetical protein | AT3G06960:PDE320:pigment defective 320 | 43 | |
| Glyma.15G037400 | hypothetical protein | AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C | 43 | |
| Glyma.16G051900 | hypothetical protein | NA | 43 | |
| Glyma.16G172800 | hypothetical protein | AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein | 43 | |
| Glyma.19G144200 | hypothetical protein | AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 43 | |
| Glyma.20G152300 | hypothetical protein | NA | 43 | |
| Glyma.03G036500 | WNK5 | AT3G51630:WNK5:with no lysine (K) kinase 5 | 42 | |
| Glyma.03G173600 | hypothetical protein | AT3G53570:FC1:serine/threonine-protein kinase AFC1 | 42 | |
| Glyma.03G204300 | hypothetical protein | AT3G52370:FLA15:FASCICLIN-like arabinogalactan protein 15__AT2G35860:FLA16:FASCICLIN-like arabinogalactan protein 16 | 42 | |
| Glyma.06G313600 | hypothetical protein | AT5G13750:ZIFL1:zinc induced facilitator-like 1 | 42 |