Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G051500 hypothetical protein AT3G06960:PDE320:pigment defective 320 43
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 43
Glyma.16G051900 hypothetical protein NA 43
Glyma.16G172800 hypothetical protein AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein 43
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 43
Glyma.20G152300 hypothetical protein NA 43
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 42
Glyma.03G173600 hypothetical protein AT3G53570:FC1:serine/threonine-protein kinase AFC1 42
Glyma.03G204300 hypothetical protein AT3G52370:FLA15:FASCICLIN-like arabinogalactan protein 15__AT2G35860:FLA16:FASCICLIN-like arabinogalactan protein 16 42
Glyma.06G313600 hypothetical protein AT5G13750:ZIFL1:zinc induced facilitator-like 1 42