Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G300500 hypothetical protein NA 44
Glyma.19G097300 hypothetical protein AT3G26890:AT3G26890:meiosis chromosome segregation family protein 44
Glyma.01G040000 hypothetical protein NA 43
Glyma.03G055900 hypothetical protein AT2G38280:FAC1:AMP deaminase, putative / myoadenylate deaminase 43
Glyma.05G029900 hypothetical protein AT5G62730:AT5G62730:Major facilitator superfamily protein 43
Glyma.06G145300 hypothetical protein AT5G05340:PRX52:Peroxidase superfamily protein 43
Glyma.06G190600 hypothetical protein NA 43
Glyma.06G293600 hypothetical protein AT1G03650:AT1G03650:Acyl-CoA N-acyltransferases (NAT) superfamily protein 43
Glyma.08G300400 hypothetical protein AT2G02910:AT2G02910:transmembrane protein (DUF616) 43
Glyma.09G050800 AAH2 AT4G20070:AAH:allantoate amidohydrolase 43