Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G182100 hypothetical protein NA 44
Glyma.07G035600 hypothetical protein AT1G67120:AT1G67120:midasin-like protein 44
Glyma.07G072700 hypothetical protein NA 44
Glyma.07G072900 hypothetical protein NA 44
Glyma.08G116700 hypothetical protein NA 44
Glyma.14G133600 hypothetical protein AT4G31390:ACDO1:Protein kinase superfamily protein 44
Glyma.15G009700 hypothetical protein NA 44
Glyma.15G224500 hypothetical protein NA 44
Glyma.16G161000 hypothetical protein NA 44
Glyma.18G104400 hypothetical protein AT2G42790:CSY3:citrate synthase 3 44