Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G193600 hypothetical protein AT5G07475:AT5G07475:Cupredoxin superfamily protein 45
Glyma.10G194300 hypothetical protein AT5G61580:PFK4:phosphofructokinase 4 45
Glyma.12G185900 hypothetical protein AT3G15040:AT3G15040:senescence regulator (Protein of unknown function, DUF584) 45
Glyma.15G108400 hypothetical protein AT1G11840:GLX1:glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 45
Glyma.15G108500 hypothetical protein NA 45
Glyma.16G042600 hypothetical protein AT5G18230:AT5G18230:transcription regulator NOT2/NOT3/NOT5 family protein 45
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 45
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 45
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 44
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 44