Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43253 trans-3-Feruloylcorosolic acid 648.3975 649.4013 167
P45751 N-Acetyl-6-O-L-fucosyl-D-glucosamine 367.1494 368.1559 167
P50045 238.1769 239.1867 167
P50584 Caudoxirene 162.1039 163.1101 167
P04849 Gentisic acid 154.0271 155.0333 166
P11735 Okaramine M 482.2333 483.2390 166
P17290 4,4-Difluoro-17beta-hydroxyandrost-5-en-3-one propionate 380.2170 381.2234 166
P21583 771.2251 772.2359 166
P23922 N-[(2Z)-2-Methoxyiminopropyl]-7H-purin-6-amine 220.1076 221.1144 166
P29865 1069.5175 1070.5247 166

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G193600 hypothetical protein AT5G07475:AT5G07475:Cupredoxin superfamily protein 45
Glyma.10G194300 hypothetical protein AT5G61580:PFK4:phosphofructokinase 4 45
Glyma.12G185900 hypothetical protein AT3G15040:AT3G15040:senescence regulator (Protein of unknown function, DUF584) 45
Glyma.15G108400 hypothetical protein AT1G11840:GLX1:glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 45
Glyma.15G108500 hypothetical protein NA 45
Glyma.16G042600 hypothetical protein AT5G18230:AT5G18230:transcription regulator NOT2/NOT3/NOT5 family protein 45
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 45
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 45
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 44
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 44