Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G193600 hypothetical protein AT5G07475:AT5G07475:Cupredoxin superfamily protein 45
Glyma.10G194300 hypothetical protein AT5G61580:PFK4:phosphofructokinase 4 45
Glyma.12G185900 hypothetical protein AT3G15040:AT3G15040:senescence regulator (Protein of unknown function, DUF584) 45
Glyma.15G108400 hypothetical protein AT1G11840:GLX1:glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 45
Glyma.15G108500 hypothetical protein NA 45
Glyma.16G042600 hypothetical protein AT5G18230:AT5G18230:transcription regulator NOT2/NOT3/NOT5 family protein 45
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 45
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 45
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 44
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 44