Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01785 428.0342 429.0403 137
P03606 N-(gamma-Glutamyl)ethanolamine 190.0927 191.1000 137
P09770 (E)-Methyl-4-hydroxycinnamate 178.0624 179.0690 137
P12839 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1245 341.1322 137
P16672 (+)-(R)-(E)-3'-Hydroxyartemidin 216.0801 217.0867 137
P17329 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0982 155.1055 137
P23820 Teucrolin D 438.1882 439.1937 137
P24445 Isobetanidin-6-O-beta-sophoroside 712.2079 713.2204 137
P24826 Actinoplanone G 618.1737 619.1789 137
P32466 Anadur 506.3394 507.3483 137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G081100 hypothetical protein NA 45
Glyma.04G084600 hypothetical protein NA 45
Glyma.05G131100 hypothetical protein AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 45
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 45
Glyma.06G307900 hypothetical protein NA 45
Glyma.07G136500 hypothetical protein AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein 45
Glyma.09G051100 hypothetical protein NA 45
Glyma.09G210200 hypothetical protein AT1G31940:AT1G31940:cystic fibrosis transmembrane conductance regulator 45
Glyma.10G192800 hypothetical protein AT1G04650:AT1G04650:holliday junction resolvase 45
Glyma.10G193500 SODB2 iron-superoxide dismutase AT4G25100:FSD1:Fe superoxide dismutase 1 45