Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P04038 | 273.6501 | 274.6556 | 262 | |
| P17302 | Candoxatrilat | 399.2291 | 400.2364 | 262 |
| P09522 | 1-Sinapoyl-2,2'-diferuloylgentiobiose | 900.2729 | 901.2756 | 259 |
| P39463 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2143 | 313.2233 | 259 |
| P18970 | Deoxypumiloside | 496.1831 | 497.1903 | 257 |
| P30042 | 939.4715 | 940.4808 | 257 | |
| P49351 | 3,16'-Dihydroxy-beta,chi-caroten-4-one | 578.3786 | 579.3833 | 256 |
| P19113 | Lyngbyabellin E | 863.2426 | 864.2468 | 255 |
| P14677 | S-(9-hydroxy-PGA1)-glutathione | 645.3312 | 646.3359 | 254 |
| P42876 | Curassavioside D1 | 1020.5233 | 1021.5370 | 251 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.03G081100 | hypothetical protein | NA | 45 | |
| Glyma.04G084600 | hypothetical protein | NA | 45 | |
| Glyma.05G131100 | hypothetical protein | AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 | 45 | |
| Glyma.06G301100 | hypothetical protein | AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 45 | |
| Glyma.06G307900 | hypothetical protein | NA | 45 | |
| Glyma.07G136500 | hypothetical protein | AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein | 45 | |
| Glyma.09G051100 | hypothetical protein | NA | 45 | |
| Glyma.09G210200 | hypothetical protein | AT1G31940:AT1G31940:cystic fibrosis transmembrane conductance regulator | 45 | |
| Glyma.10G192800 | hypothetical protein | AT1G04650:AT1G04650:holliday junction resolvase | 45 | |
| Glyma.10G193500 | SODB2 | iron-superoxide dismutase | AT4G25100:FSD1:Fe superoxide dismutase 1 | 45 |