Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24140 Aristolindiquinone 218.0573 219.0638 183
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 427.1313 183
P36026 O-Phosphoviomycin 765.2885 766.2977 183
P37799 4-pregnene-17alpha,20beta,21-triol-3,11-dione 362.2054 363.2127 183
P38116 Leuphasyl 569.2841 570.2907 183
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 556.2481 183
P44241 Avermectin A2a monosaccharide 760.4380 761.4431 183
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 440.2339 183
P46875 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2077 278.2165 183
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 265.1335 182

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G081100 hypothetical protein NA 45
Glyma.04G084600 hypothetical protein NA 45
Glyma.05G131100 hypothetical protein AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 45
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 45
Glyma.06G307900 hypothetical protein NA 45
Glyma.07G136500 hypothetical protein AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein 45
Glyma.09G051100 hypothetical protein NA 45
Glyma.09G210200 hypothetical protein AT1G31940:AT1G31940:cystic fibrosis transmembrane conductance regulator 45
Glyma.10G192800 hypothetical protein AT1G04650:AT1G04650:holliday junction resolvase 45
Glyma.10G193500 SODB2 iron-superoxide dismutase AT4G25100:FSD1:Fe superoxide dismutase 1 45