Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20244 (+)-Trehazolin 366.1291 367.1369 140
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 185.1523 140
P26724 Arginylthreonine 275.1606 276.1676 140
P28637 630.7857 631.7925 140
P32826 Aszonalenin 373.1797 374.1870 140
P33750 6,8-Epoxy-p-menthane 154.1356 155.1413 140
P34054 Scandenolide 334.1041 335.1106 140
P35584 Maetenoside B 1202.5971 1203.6044 140
P44811 Fargoside D 778.4074 779.4157 140
P46204 SB 311009 408.2576 409.2666 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G104700 hypothetical protein NA 47
Glyma.02G129200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 46
Glyma.02G130200 hypothetical protein AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein 46
Glyma.02G131600 hypothetical protein AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein 46
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 46
Glyma.03G148900 hypothetical protein NA 46
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 46
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 46
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein__AT5G12350:AT5G12350:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 46
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 46