Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G104700 hypothetical protein NA 47
Glyma.02G129200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 46
Glyma.02G130200 hypothetical protein AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein 46
Glyma.02G131600 hypothetical protein AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein 46
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 46
Glyma.03G148900 hypothetical protein NA 46
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 46
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 46
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein__AT5G12350:AT5G12350:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 46
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 46