Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G104700 hypothetical protein NA 47
Glyma.02G129200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 46
Glyma.02G130200 hypothetical protein AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein 46
Glyma.02G131600 hypothetical protein AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein 46
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 46
Glyma.03G148900 hypothetical protein NA 46
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 46
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 46
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein__AT5G12350:AT5G12350:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 46
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 46