Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54929 1,3-Diisopropylbenzene 162.1388 163.1452 —
P54932 Punicatannin C 660.1684 661.1736 —
P54933 Hydroxyglimepiride 506.2176 507.2232 —
P54939 302.6174 303.6228 —
P54940 Diallyl hexasulfide 273.9157 274.9231 —
P54942 Darapladib 666.2701 667.2786 —
P54943 Stellettin H 508.3192 509.3291 —
P54944 Boceprevir 519.3457 520.3517 —
P54946 DL-Methionine-4-antipyrineamide 334.1464 335.1552 —
P54949 335.1497 336.1575 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G136100 hypothetical protein NA 47
Glyma.08G116400 hypothetical protein NA 47
Glyma.09G249800 hypothetical protein AT3G47390:PHS1:cytidine/deoxycytidylate deaminase family protein 47
Glyma.10G193800 hypothetical protein NA 47
Glyma.11G058500 hypothetical protein AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein 47
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 47
Glyma.13G067900 hypothetical protein NA 47
Glyma.14G044100 hypothetical protein AT5G62300:AT5G62300:Ribosomal protein S10p/S20e family protein 47
Glyma.16G055000 hypothetical protein NA 47
Glyma.16G140800 hypothetical protein AT3G50690:AT3G50690:Leucine-rich repeat (LRR) family protein 47