Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20244 (+)-Trehazolin 366.1291 367.1369 140
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 185.1523 140
P26724 Arginylthreonine 275.1606 276.1676 140
P28637 630.7857 631.7925 140
P32826 Aszonalenin 373.1797 374.1870 140
P33750 6,8-Epoxy-p-menthane 154.1356 155.1413 140
P34054 Scandenolide 334.1041 335.1106 140
P35584 Maetenoside B 1202.5971 1203.6044 140
P44811 Fargoside D 778.4074 779.4157 140
P46204 SB 311009 408.2576 409.2666 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 48
Glyma.09G200300 hypothetical protein NA 48
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 48
Glyma.11G117500 hypothetical protein NA 48
Glyma.16G117000 hypothetical protein NA 48
Glyma.16G144600 hypothetical protein NA 48
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 47
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 47
Glyma.03G246500 hypothetical protein AT5G49570:PNG1:peptide-N-glycanase 1 47
Glyma.06G285000 hypothetical protein AT2G42390:AT2G42390:kinase C substrate, heavy chain-like protein 47