Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 48
Glyma.09G200300 hypothetical protein NA 48
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 48
Glyma.11G117500 hypothetical protein NA 48
Glyma.16G117000 hypothetical protein NA 48
Glyma.16G144600 hypothetical protein NA 48
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 47
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 47
Glyma.03G246500 hypothetical protein AT5G49570:PNG1:peptide-N-glycanase 1 47
Glyma.06G285000 hypothetical protein AT2G42390:AT2G42390:kinase C substrate, heavy chain-like protein 47