Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43147 Avermectin A2b monosaccharide 746.4252 747.4310 179
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 883.4653 179
P43704 3'''-O-Methylfukugetin 570.1129 571.1194 179
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 363.2517 179
P02880 183.5443 184.5519 178
P07726 Tolmetin glucuronide 433.1375 434.1439 178
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 295.1337 178
P14990 Enkephalin L 555.2689 556.2764 178
P15582 853.3764 854.3854 178
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 284.1837 178

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G205300 hypothetical protein NA 1,313
Glyma.19G029600 hypothetical protein NA 1,303
Glyma.18G266100 hypothetical protein NA 1,302
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 1,299
Glyma.06G305600 hypothetical protein NA 1,290
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1,284
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1,280
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1,239
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1,223
Glyma.14G066800 hypothetical protein NA 1,223