Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06364 785.2020 786.2053 104
P09170 Daphnoline 580.2617 581.2695 104
P12572 Thiomarinol B 672.2387 673.2441 104
P13879 Furametpyr 333.1246 334.1317 104
P14685 229.5656 230.5721 104
P16570 N-[(1S)-1-(Ethoxycarbonyl)-3-phenylpropyl]-L-alanyl-L-proline 3-nitrooxypropyl ester 479.2301 480.2398 104
P18196 105.0291 106.0370 104
P22412 2-[4-(3-Hydroxypropyl)-2-methoxyphenoxy]-1,3-propanediol 256.1299 257.1368 104
P23185 (E)-3,7-Dimethyl-2,6-octadienyl nonanoate 294.2531 295.2600 104
P23839 Pelargonidin 3-O-[2-O-beta-D-glucopyranosyl-6-O-(E)-p-coumaroyl-beta-D-glucopyranoside]-5-O-(beta-D-glucopyranoside) 902.2475 903.2557 104

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G205300 hypothetical protein NA 1,313
Glyma.19G029600 hypothetical protein NA 1,303
Glyma.18G266100 hypothetical protein NA 1,302
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 1,299
Glyma.06G305600 hypothetical protein NA 1,290
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1,284
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1,280
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1,239
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1,223
Glyma.14G066800 hypothetical protein NA 1,223