Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13499 2-Aminoindan 133.0884 134.0953 109
P16011 Dibenzo-P-dioxin 402.1820 403.1913 109
P16450 Herbarumin II 244.1296 245.1355 109
P17257 Clibadiolide 778.3857 779.3905 109
P19615 Biapenem 350.1055 351.1144 109
P20371 694.0848 695.0881 109
P21143 U 77802 820.2298 821.2375 109
P22945 Saframycin B 537.2019 538.2138 109
P25648 Triamcinolone hexacetonide 532.2833 533.2898 109
P29256 Annulatophenonoside 408.1070 409.1124 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G205300 hypothetical protein NA 1,313
Glyma.19G029600 hypothetical protein NA 1,303
Glyma.18G266100 hypothetical protein NA 1,302
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 1,299
Glyma.06G305600 hypothetical protein NA 1,290
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1,284
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1,280
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1,239
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1,223
Glyma.14G066800 hypothetical protein NA 1,223