Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35704 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2332 352.2403 144
P55192 2-Hydroxy-24-keto-octacosanolide 452.3854 453.3951 144
P00964 Glutarimide 113.0469 227.1009 143
P11762 (S)-ATPA 228.1093 229.1177 143
P16245 173.1267 174.1346 143
P18452 409.1206 410.1280 143
P26523 3-(3,5-dihydroxyphenyl)-4-(2-{3-[6-hydroxy-3-(3-hydroxyphenyl)-2-phenyl-2,3-dihydro-1-benzofuran-4-yl]-2-phenyl-2,3-dihydro-1-benzofuran-5-yl}ethenyl)-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-5,6-diol 874.2788 875.2828 143
P28153 Dehydroprotostemonine 415.2032 416.2104 143
P42603 463.1322 464.1409 143
P48055 1-hexadecyl-2-(9Z-nonadecenoyl)-glycero-3-phospho-(1'-sn-glycerol) 748.5600 749.5665 143

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G030100 hypothetical protein AT2G43290:MSS3:Calcium-binding EF-hand family protein__AT4G03290:AT4G03290:EF hand calcium-binding protein family 49
Glyma.18G252200 hypothetical protein NA 49
Glyma.18G257800 hypothetical protein NA 49
Glyma.19G193500 hypothetical protein NA 49
Glyma.20G058300 hypothetical protein AT2G31340:emb1381:embryo defective 1381 49
Glyma.20G058500 hypothetical protein AT5G35690:AT5G35690:zinc metalloproteinase-like protein 49
Glyma.20G058600 hypothetical protein NA 49
Glyma.20G058900 hypothetical protein NA 49
Glyma.20G059000 hypothetical protein AT4G12650:AT4G12650:Endomembrane protein 70 protein family 49
Glyma.20G060000 hypothetical protein AT2G04360:AT2G04360:uncharacterized protein 49