Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55600	4-O-Demethylpenclomedine	308.8697	309.8759	—
P55602	24-homo-3alpha,7alpha,16alpha-trihydroxy-5beta-cholan-25-oic acid	422.3005	423.3085	—
P55603	Faleoconitine	689.3183	690.3285	—
P55604		128.9612	129.9688	—
P55605		113.9706	114.9777	—
P55606		134.9623	135.9696	—
P55607	Citranaxanthin	456.3418	457.3495	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G030100	hypothetical protein	AT2G43290:MSS3:Calcium-binding EF-hand family protein__AT4G03290:AT4G03290:EF hand calcium-binding protein family	49
Glyma.18G252200	hypothetical protein	NA	49
Glyma.18G257800	hypothetical protein	NA	49
Glyma.19G193500	hypothetical protein	NA	49
Glyma.20G058300	hypothetical protein	AT2G31340:emb1381:embryo defective 1381	49
Glyma.20G058500	hypothetical protein	AT5G35690:AT5G35690:zinc metalloproteinase-like protein	49
Glyma.20G058600	hypothetical protein	NA	49
Glyma.20G058900	hypothetical protein	NA	49
Glyma.20G059000	hypothetical protein	AT4G12650:AT4G12650:Endomembrane protein 70 protein family	49
Glyma.20G060000	hypothetical protein	AT2G04360:AT2G04360:uncharacterized protein	49