Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34102 | 4,4,6,6-Tetramethyl-bicyclo[3.1.0]hex-2-ene | 136.1242 | 273.2557 | 131 |
| P34777 | 311.2896 | 312.2966 | 131 | |
| P36124 | Lusitanicoside | 442.1820 | 443.1889 | 131 |
| P38167 | 470.7163 | 471.7226 | 131 | |
| P45059 | 1-hexadecanoyl-2-succinyl-sn-glycero-3-phospho-(1'-sn-glycerol) | 584.2964 | 585.3055 | 131 |
| P46718 | 276.6279 | 277.6353 | 131 | |
| P53547 | PA(i-12:0/5-iso PGF2VI) | 662.3876 | 663.3948 | 131 |
| P55453 | Mangiferin 6'-gallate | 574.0981 | 575.1037 | 131 |
| P08500 | Carpachromene dimethyl ether | 364.1312 | 365.1390 | 130 |
| P09738 | Gelsemicine | 358.1880 | 359.1951 | 130 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.15G030100 | hypothetical protein | AT2G43290:MSS3:Calcium-binding EF-hand family protein__AT4G03290:AT4G03290:EF hand calcium-binding protein family | 49 | |
| Glyma.18G252200 | hypothetical protein | NA | 49 | |
| Glyma.18G257800 | hypothetical protein | NA | 49 | |
| Glyma.19G193500 | hypothetical protein | NA | 49 | |
| Glyma.20G058300 | hypothetical protein | AT2G31340:emb1381:embryo defective 1381 | 49 | |
| Glyma.20G058500 | hypothetical protein | AT5G35690:AT5G35690:zinc metalloproteinase-like protein | 49 | |
| Glyma.20G058600 | hypothetical protein | NA | 49 | |
| Glyma.20G058900 | hypothetical protein | NA | 49 | |
| Glyma.20G059000 | hypothetical protein | AT4G12650:AT4G12650:Endomembrane protein 70 protein family | 49 | |
| Glyma.20G060000 | hypothetical protein | AT2G04360:AT2G04360:uncharacterized protein | 49 |