Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34730 MANNICH BASES 780.2858 781.2907 137
P40695 Bacopasaponin A 736.4305 737.4425 137
P42674 Anzuroside 640.3459 641.3511 137
P43702 1069.0524 1070.0592 137
P47544 Ancorinoside C 861.4698 862.4684 137
P08475 Syringin 372.1434 373.1471 136
P08524 813.2247 814.2377 136
P09463 Cudratricusxanthone H 394.1400 395.1477 136
P10397 Navitoclax 973.3105 974.3101 136
P15231 2-Propylphenol 136.0871 137.0946 136

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G180200 hypothetical protein NA 50
Glyma.02G127000 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein 49
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 49
Glyma.08G294900 hypothetical protein AT1G59720:CRR28:Tetratricopeptide repeat (TPR)-like superfamily protein 49
Glyma.10G236800 hypothetical protein NA 49
Glyma.11G095000 hypothetical protein NA 49
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 49
Glyma.14G149900 hypothetical protein NA 49
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 49
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 49