Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55180 Haloxyline B 435.3680 436.3770 —
P55183 Ethyl (2S,3S)-3-[[(2S)-1-[[(2S)-1-hydroxypent-4-yn-2-yl]amino]-4-methyl-1-oxopentan-2-yl]carbamoyl]oxirane-2-carboxylate 354.1772 355.1835 —
P55184 Speciosin D 194.0581 195.0659 —
P55188 Prop-2-enylcyclohexane 124.1246 125.1317 —
P55189 15-Acetoxyverruculogen 569.2418 570.2499 —
P55191 609.0476 610.0568 —
P55194 Sarglaperoxide A 384.1932 385.2011 —
P55195 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0982 167.1053 —
P55197 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2686 417.2763 —
P55198 775.2278 776.2313 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G180200 hypothetical protein NA 50
Glyma.02G127000 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein 49
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 49
Glyma.08G294900 hypothetical protein AT1G59720:CRR28:Tetratricopeptide repeat (TPR)-like superfamily protein 49
Glyma.10G236800 hypothetical protein NA 49
Glyma.11G095000 hypothetical protein NA 49
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 49
Glyma.14G149900 hypothetical protein NA 49
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 49
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 49