Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31675 N-Deisopropyl-fluvastatin 369.1340 370.1426 184
P34634 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1959 407.2047 184
P38526 509.1856 510.1928 184
P46681 Selanc 751.4280 752.4357 184
P46758 Cyclovirobuxeine F 560.3627 561.3709 184
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 450.1521 183
P13918 Trifuhalol B 390.0568 391.0648 183
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 314.1834 183
P15192 Mycalolide A 908.4443 909.4491 183
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 193.0851 183

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G180200 hypothetical protein NA 50
Glyma.02G127000 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein 49
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 49
Glyma.08G294900 hypothetical protein AT1G59720:CRR28:Tetratricopeptide repeat (TPR)-like superfamily protein 49
Glyma.10G236800 hypothetical protein NA 49
Glyma.11G095000 hypothetical protein NA 49
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 49
Glyma.14G149900 hypothetical protein NA 49
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 49
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 49