Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09654 2-Hydroxyfelbamate 254.0901 255.0955 141
P16359 197.1097 198.1162 141
P17680 Glycosmisic acid 372.1197 373.1259 141
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 120.0490 141
P26911 1-(9Z-octadecenoyl)-2-(4,7-dioxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-myo-inositol) 736.3391 737.3480 141
P27176 FD 212 268.1287 269.1370 141
P27832 Mabiogenin 3-[rhamnosyl-(1->6)-glucoside] 796.4504 797.4579 141
P29828 4'-Oxonebramine 304.1730 305.1785 141
P32281 Aristolindiquinone 218.0561 219.0635 141
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 219.1361 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G206300 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 51
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 51
Glyma.20G218700 hypothetical protein AT5G47520:RABA5a:RAB GTPase homolog A5A 51
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 50
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 50
Glyma.10G186500 PT7 NA 50
Glyma.10G236000 hypothetical protein NA 50
Glyma.10G236100 hypothetical protein AT5G52280:AT5G52280:Myosin heavy chain-related protein 50
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK18:calcium-dependent protein kinase 18 50
Glyma.13G198600 hypothetical protein AT3G07940:AT3G07940:Calcium-dependent ARF-type GTPase activating protein family 50