Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G206300 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 51
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 51
Glyma.20G218700 hypothetical protein AT5G47520:RABA5a:RAB GTPase homolog A5A 51
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 50
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 50
Glyma.10G186500 PT7 NA 50
Glyma.10G236000 hypothetical protein NA 50
Glyma.10G236100 hypothetical protein AT5G52280:AT5G52280:Myosin heavy chain-related protein 50
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK18:calcium-dependent protein kinase 18 50
Glyma.13G198600 hypothetical protein AT3G07940:AT3G07940:Calcium-dependent ARF-type GTPase activating protein family 50