Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08385 2'-N-Hydroxynocardicin C 502.1713 503.1770 135
P14806 [3R-(3alpha,4beta,5alpha,5aalpha,6alpha,9beta,9aalpha,10R*)]-5-(Acetyloxy)-6-(benzoyloxy)octahydro-4,9-dihydroxy-2,2,5a,9-tetramethyl-2H-3,9a-methano-1-benzoxepin-10-yl ester 3-pyridinecarboxylic acid 553.2239 554.2323 135
P15635 4-Aminophenylacetic acid 151.0649 152.0709 135
P17046 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1084 123.1157 135
P19081 2-Methyl-1-hydroxybutyl-ThPP 510.1174 511.1224 135
P21894 N-[4-[3-Chloro-4-(2-pyridinylmethoxy)anilino]-3-cyano-7-ethoxy-6-quinolinyl]-4-(dimethylamino)-2-butenamide 556.1973 557.2054 135
P35539 2 Inverted exclamation marka,7 inverted exclamation marka-Dichlorodihydrofluorescein diacetate 486.0292 487.0326 135
P41280 425.6856 426.6953 135
P44414 Wattoside H 688.3271 689.3351 135
P44478 Curassavioside G1 1034.5412 1035.5401 135

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G170700 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 51
Glyma.11G170800 hypothetical protein NA 51
Glyma.11G170900 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 51
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 51
Glyma.12G109600 hypothetical protein AT4G03420:AT4G03420: 51
Glyma.12G109700 hypothetical protein AT1G03620:AT1G03620:ELMO/CED-12 family protein 51
Glyma.13G201300 hypothetical protein NA 51
Glyma.13G204700 hypothetical protein AT1G11720:SS3:starch synthase 3 51
Glyma.13G204900 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 51
Glyma.14G206200 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 51