Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P17438 725.1565 726.1623 139
P19352 Kaempferol 3-apiosyl-(1->2)-glucoside-4'-glucoside 742.1996 743.2109 139
P19709 Aclacinomycin Y 809.3265 810.3350 139
P24220 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1801 453.1889 139
P26278 Miraziridine A 668.3922 669.3989 139
P27540 Delavaconine 393.2469 394.2532 139
P31644 8-(2,4-Dichlorophenyl)-N-(1,3-dimethoxypropan-2-yl)-2,7-dimethylpyrazolo[5,1-f][1,3,5]triazin-4-amine 409.1141 410.1208 139
P32493 Glunicate 704.1931 705.2046 139
P38985 Mucronulatol-(4->5')-vestitol 572.1988 573.2085 139
P39827 531.2999 532.3078 139

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G170700 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 51
Glyma.11G170800 hypothetical protein NA 51
Glyma.11G170900 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 51
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 51
Glyma.12G109600 hypothetical protein AT4G03420:AT4G03420: 51
Glyma.12G109700 hypothetical protein AT1G03620:AT1G03620:ELMO/CED-12 family protein 51
Glyma.13G201300 hypothetical protein NA 51
Glyma.13G204700 hypothetical protein AT1G11720:SS3:starch synthase 3 51
Glyma.13G204900 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 51
Glyma.14G206200 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 51