Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34102 | 4,4,6,6-Tetramethyl-bicyclo[3.1.0]hex-2-ene | 136.1242 | 273.2557 | 131 |
| P34777 | 311.2896 | 312.2966 | 131 | |
| P36124 | Lusitanicoside | 442.1820 | 443.1889 | 131 |
| P38167 | 470.7163 | 471.7226 | 131 | |
| P45059 | 1-hexadecanoyl-2-succinyl-sn-glycero-3-phospho-(1'-sn-glycerol) | 584.2964 | 585.3055 | 131 |
| P46718 | 276.6279 | 277.6353 | 131 | |
| P53547 | PA(i-12:0/5-iso PGF2VI) | 662.3876 | 663.3948 | 131 |
| P55453 | Mangiferin 6'-gallate | 574.0981 | 575.1037 | 131 |
| P08500 | Carpachromene dimethyl ether | 364.1312 | 365.1390 | 130 |
| P09738 | Gelsemicine | 358.1880 | 359.1951 | 130 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.11G170700 | hypothetical protein | AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 | 51 | |
| Glyma.11G170800 | hypothetical protein | NA | 51 | |
| Glyma.11G170900 | hypothetical protein | AT5G58610:AT5G58610:PHD finger transcription factor | 51 | |
| Glyma.12G055100 | hypothetical protein | AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase | 51 | |
| Glyma.12G109600 | hypothetical protein | AT4G03420:AT4G03420: | 51 | |
| Glyma.12G109700 | hypothetical protein | AT1G03620:AT1G03620:ELMO/CED-12 family protein | 51 | |
| Glyma.13G201300 | hypothetical protein | NA | 51 | |
| Glyma.13G204700 | hypothetical protein | AT1G11720:SS3:starch synthase 3 | 51 | |
| Glyma.13G204900 | hypothetical protein | AT1G64570:DUO3:Homeodomain-like superfamily protein | 51 | |
| Glyma.14G206200 | hypothetical protein | AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein | 51 |