Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24939 Seletalisib 482.0850 483.0920 153
P27043 134.0430 135.0499 153
P30381 D,L-Buthionine 191.0988 192.1064 153
P31932 Demethylwedelolactone 300.0258 301.0323 153
P41912 Ixerin N 538.2386 539.2490 153
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 303.1009 152
P12550 803.2218 804.2263 152
P14195 4-Amino-2,3-xylenol 137.0836 138.0907 152
P20272 Aristoloterpenate II 527.1981 528.2063 152
P27381 Gliadins 631.2917 632.3016 152

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G102100 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 52
Glyma.01G021000 hypothetical protein NA 51
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 51
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 51
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 51
Glyma.11G167100 hypothetical protein NA 51
Glyma.11G167400 hypothetical protein NA 51
Glyma.11G169500 hypothetical protein NA 51
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 51
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 51