Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G102100 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 52
Glyma.01G021000 hypothetical protein NA 51
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 51
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 51
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 51
Glyma.11G167100 hypothetical protein NA 51
Glyma.11G167400 hypothetical protein NA 51
Glyma.11G169500 hypothetical protein NA 51
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 51
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 51