Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02752 Polanrazine B 377.1240 378.1297 180
P06961 Norhygrine 127.0981 128.1057 180
P10476 264.6079 265.6141 180
P10479 L-Arogenate 227.0795 228.0865 180
P12237 Siwanine A 505.2575 506.2645 180
P16337 Triphyllin A 656.2395 657.2469 180
P17370 Kosinostatin 616.2046 617.2161 180
P26964 688.2990 689.3077 180
P29279 Cyromazine 166.0980 167.1049 180
P30762 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1160 180

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G102100 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 52
Glyma.01G021000 hypothetical protein NA 51
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 51
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 51
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 51
Glyma.11G167100 hypothetical protein NA 51
Glyma.11G167400 hypothetical protein NA 51
Glyma.11G169500 hypothetical protein NA 51
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 51
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 51