Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15114 831.2649 832.2732 290
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 767.4535 289
P43639 17-Methyloctadecasphinganine 315.3118 316.3193 287
P54549 Akuammine 382.1900 383.2001 286
P04966 Dihydroxytryptamine 192.0882 193.0951 285
P27837 433.2608 434.2695 282
P11278 27-O-Demethylrifamycin SV 683.3041 684.3108 279
P22499 Rosmadial 344.1593 689.3243 279
P08557 Dracorubin 488.1612 489.1703 278
P12127 Paulomycin F 702.1925 703.2042 274

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G102100 hypothetical protein AT1G50900:GDC1:Ankyrin repeat family protein 52
Glyma.01G021000 hypothetical protein NA 51
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 51
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 51
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 51
Glyma.11G167100 hypothetical protein NA 51
Glyma.11G167400 hypothetical protein NA 51
Glyma.11G169500 hypothetical protein NA 51
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 51
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 51