Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G255200 hypothetical protein AT3G23540:AT3G23540:alpha/beta-Hydrolases superfamily protein__AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G255400 hypothetical protein AT5G19010:MPK16:mitogen-activated protein kinase 16 52
Glyma.07G255900 hypothetical protein AT3G23600:AT3G23600:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G256200 hypothetical protein AT3G23580:RNR2A:ribonucleotide reductase 2A 52
Glyma.07G257300 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein__AT5G19090:AT5G19090:Heavy metal transport/detoxification superfamily protein 52
Glyma.08G214500 hypothetical protein AT1G15740:AT1G15740:Leucine-rich repeat family protein 52
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 52
Glyma.11G170100 hypothetical protein NA 52
Glyma.14G207500 hypothetical protein NA 52
Glyma.16G197200 hypothetical protein NA 52