Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15114 831.2649 832.2732 290
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 767.4535 289
P43639 17-Methyloctadecasphinganine 315.3118 316.3193 287
P54549 Akuammine 382.1900 383.2001 286
P04966 Dihydroxytryptamine 192.0882 193.0951 285
P27837 433.2608 434.2695 282
P11278 27-O-Demethylrifamycin SV 683.3041 684.3108 279
P22499 Rosmadial 344.1593 689.3243 279
P08557 Dracorubin 488.1612 489.1703 278
P12127 Paulomycin F 702.1925 703.2042 274

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G255200 hypothetical protein AT3G23540:AT3G23540:alpha/beta-Hydrolases superfamily protein__AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G255400 hypothetical protein AT5G19010:MPK16:mitogen-activated protein kinase 16 52
Glyma.07G255900 hypothetical protein AT3G23600:AT3G23600:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G256200 hypothetical protein AT3G23580:RNR2A:ribonucleotide reductase 2A 52
Glyma.07G257300 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein__AT5G19090:AT5G19090:Heavy metal transport/detoxification superfamily protein 52
Glyma.08G214500 hypothetical protein AT1G15740:AT1G15740:Leucine-rich repeat family protein 52
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 52
Glyma.11G170100 hypothetical protein NA 52
Glyma.14G207500 hypothetical protein NA 52
Glyma.16G197200 hypothetical protein NA 52