Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06071 Proteacin 473.1514 474.1552 216
P23606 981.3248 982.3265 216
P25233 Ligujapone 202.1001 203.1075 216
P34921 Xyloccensin O 700.2387 701.2457 216
P52079 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1493 205.1577 216
P08763 831.2168 832.2238 215
P36727 Cyclopentenyl propionate musk 264.2057 265.2136 215
P40346 570.1408 571.1471 215
P48063 203.5863 204.5948 215
P52212 2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide 365.2460 366.2546 215

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G255200 hypothetical protein AT3G23540:AT3G23540:alpha/beta-Hydrolases superfamily protein__AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G255400 hypothetical protein AT5G19010:MPK16:mitogen-activated protein kinase 16 52
Glyma.07G255900 hypothetical protein AT3G23600:AT3G23600:alpha/beta-Hydrolases superfamily protein 52
Glyma.07G256200 hypothetical protein AT3G23580:RNR2A:ribonucleotide reductase 2A 52
Glyma.07G257300 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein__AT5G19090:AT5G19090:Heavy metal transport/detoxification superfamily protein 52
Glyma.08G214500 hypothetical protein AT1G15740:AT1G15740:Leucine-rich repeat family protein 52
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 52
Glyma.11G170100 hypothetical protein NA 52
Glyma.14G207500 hypothetical protein NA 52
Glyma.16G197200 hypothetical protein NA 52