Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45405 Tabun 162.0554 163.0611 139
P01361 Arctinol 264.0284 265.0373 138
P04584 2-Methylacetoacetic acid 116.0478 117.0546 138
P06382 eribaxaban 484.1280 485.1368 138
P10526 3,4,5-Trimethoxyphenyl acetate 226.0836 227.0894 138
P15136 799.3134 800.3211 138
P21419 Hemiphroside A 668.2311 669.2398 138
P26172 6'-Oxolividamine 305.1605 306.1677 138
P26977 Benzyl chloroacetate 184.0295 185.0374 138
P27453 6alpha,9alpha-Difluoroprednisolone-17-butyrate 466.2166 467.2245 138

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G063800 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 53
Glyma.03G152800 hypothetical protein AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 53
Glyma.03G153200 hypothetical protein NA 53
Glyma.09G209800 hypothetical protein NA 53
Glyma.13G198800 hypothetical protein NA 53
Glyma.16G020900 hypothetical protein NA 53
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 53
Glyma.17G251700 hypothetical protein NA 53
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 53
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 52