Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09175 N-((6-Methyl-5-oxo-3-thiomorpholinyl)carbonyl)-L-histidyl-L-proline 409.1415 410.1489 174
P13516 17-AAG 585.3021 586.3065 174
P32078 PA(20:4(6Z,8E,10E,14Z)-2OH(5S,12R)/18:4(6Z,9Z,12Z,15Z)) 748.4353 749.4432 174
P36912 Rhodojaponin IV 454.2533 455.2601 174
P39839 223.1261 224.1336 174
P40128 O-Demethylpuromycin 457.2031 458.2087 174
P42303 Swietenitin C 814.3052 815.3111 174
P43471 Huperzine T 277.1674 278.1738 174
P44943 Asparagoside C 740.4321 741.4375 174
P50462 Fungicide K 99-5278B 564.3682 565.3728 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G063800 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 53
Glyma.03G152800 hypothetical protein AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 53
Glyma.03G153200 hypothetical protein NA 53
Glyma.09G209800 hypothetical protein NA 53
Glyma.13G198800 hypothetical protein NA 53
Glyma.16G020900 hypothetical protein NA 53
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 53
Glyma.17G251700 hypothetical protein NA 53
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 53
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 52