Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G152800 hypothetical protein NA 54
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 54
Glyma.17G038500 hypothetical protein NA 54
Glyma.17G207000 hypothetical protein NA 54
Glyma.17G208400 hypothetical protein NA 54
Glyma.17G208500 hypothetical protein NA 54
Glyma.17G209600 hypothetical protein AT2G25530:AT2G25530:AFG1-like ATPase family protein 54
Glyma.17G209700 hypothetical protein NA 54
Glyma.18G044100 hypothetical protein NA 54
Glyma.20G105600 hypothetical protein AT2G17033:AT2G17033:pentatricopeptide (PPR) repeat-containing protein 54