Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00589 Lykurim 364.0967 365.1018 159
P00715 Loviride 350.0610 351.0678 159
P03958 Asperpyrone A 572.1410 573.1433 159
P05872 Formebolone 344.2031 345.2088 159
P08490 Torokonine 449.2231 450.2264 159
P10909 7-(3-((3-Formylphenoxy)methyl)-1,5-dimethyl-1H-pyrazol-4-yl)-3-(3-(naphthalen-1-yloxy)propyl)-1H-indole-2-carboxylic acid 573.2300 574.2360 159
P13378 (L-Threonyl)adenylate 448.1096 449.1147 159
P17048 761.2212 762.2314 159
P19069 353.5640 354.5707 159
P29235 467.7279 468.7315 159

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 55
Glyma.18G050100 hypothetical protein NA 55
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 55
Glyma.01G234300 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 54
Glyma.04G190900 hypothetical protein AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2 54
Glyma.05G222900 hypothetical protein AT4G29490:AT4G29490:Metallopeptidase M24 family protein 54
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 54
Glyma.08G146100 hypothetical protein NA 54
Glyma.11G122700 hypothetical protein NA 54
Glyma.13G204800 hypothetical protein AT4G04640:ATPC1:ATPase, F1 complex, gamma subunit protein 54