Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30741 3-(Allyloxy)estra-1,3,5(10)-triene-16beta,17beta-diol 328.2035 329.2092 187
P31583 Rhusemialin A 582.2091 583.2134 187
P46610 Sarpogrelate 429.2126 430.2176 187
P03242 S-Adenosyl-L-homocysteine 384.1215 385.1299 186
P09306 6Z-octenoic acid 142.0971 143.1040 186
P19172 5-Hydroxydec-8-enedioylcarnitine 359.2012 360.2078 186
P35787 PG(a-25:0/PGD2) 944.6181 945.6254 186
P51071 Luteolin 7-(2''-glucosyllactate) 520.1177 521.1264 186
P53404 2-Chloro-4-[(dimethylcarbamoyl)amino]benzoic acid 242.0430 243.0520 186
P11526 (-)-2,3-Dihydrocitromycetin 292.0562 293.0641 185

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 55
Glyma.18G050100 hypothetical protein NA 55
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 55
Glyma.01G234300 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 54
Glyma.04G190900 hypothetical protein AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2 54
Glyma.05G222900 hypothetical protein AT4G29490:AT4G29490:Metallopeptidase M24 family protein 54
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 54
Glyma.08G146100 hypothetical protein NA 54
Glyma.11G122700 hypothetical protein NA 54
Glyma.13G204800 hypothetical protein AT4G04640:ATPC1:ATPase, F1 complex, gamma subunit protein 54