Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54539 | Sophoraflavanone J | 650.2518 | 651.2584 | — |
| P54548 | (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile | 202.1257 | 203.1332 | — |
| P54552 | 119.0802 | 120.0872 | — | |
| P54557 | Styrene | 104.0616 | 105.0687 | — |
| P54565 | 257.2589 | 258.2663 | — | |
| P54569 | 128.9610 | 129.9684 | — | |
| P54571 | 1-(9Z-nonadecenoyl)-glycero-3-phosphate | 450.2730 | 451.2794 | — |
| P54575 | 109.0076 | 110.0149 | — | |
| P54581 | 360.8103 | 361.8184 | — | |
| P54587 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2077 | 313.2144 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.19G128200 | hypothetical protein | NA | 1,463 | |
| Glyma.14G068500 | hypothetical protein | NA | 1,452 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1,439 | |
| Glyma.16G139000 | hypothetical protein | NA | 1,430 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1,414 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1,414 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class transcription factor (DUF630 and DUF632) | 1,364 | |
| Glyma.06G305300 | hypothetical protein | NA | 1,332 | |
| Glyma.13G203900 | hypothetical protein | NA | 1,329 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1,324 |