Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00788 Tyrphostin B42 294.0991 295.1079 199
P07827 809.2516 810.2565 199
P14487 Yuzurimine E 429.2528 430.2610 199
P42503 121.9563 122.9631 199
P50354 Nodulisporic acid C2 701.4348 702.4409 199
P54402 Catuabine E 371.1815 372.1888 199
P26744 FR901537 507.1481 508.1541 198
P04642 Aminoacylase 536.2172 537.2249 197
P15145 Geodiamolide M 609.2125 610.2230 197
P33997 615.3757 616.3848 197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G128200 hypothetical protein NA 1,463
Glyma.14G068500 hypothetical protein NA 1,452
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1,439
Glyma.16G139000 hypothetical protein NA 1,430
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1,414
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1,414
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class transcription factor (DUF630 and DUF632) 1,364
Glyma.06G305300 hypothetical protein NA 1,332
Glyma.13G203900 hypothetical protein NA 1,329
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1,324