Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P21750 Vismiaguianone E 428.1608 429.1691 106
P24821 ethyl 11Z-hexadecenoate 282.2559 283.2629 106
P28118 1022.3240 1023.3369 106
P28609 Methylsulfonyl 4-[(2-carbamimidoyl-3,4-dihydro-1H-isoquinolin-7-yl)oxymethyl]-1-pyridin-4-ylpiperidine-4-carboxylate 487.1867 488.1962 106
P29662 2,3-Dihydro-9-hydroxy-2-[1-(6-feruloyl)-beta-D-glucosyloxy-1-methylethyl]-7H-furo[3,2-g][1]benzopyran-7-one 600.1811 601.1892 106
P31521 Conodiparine F 736.3832 737.3898 106
P31941 9-chloro-10-hydroxy-octadecanoic acid 334.2284 335.2363 106
P32356 PA(a-15:0/5-iso PGF2VI) 704.4251 705.4351 106
P32718 A 75943 281.1621 282.1689 106
P35068 508.3543 509.3632 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G128200 hypothetical protein NA 1,463
Glyma.14G068500 hypothetical protein NA 1,452
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1,439
Glyma.16G139000 hypothetical protein NA 1,430
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1,414
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1,414
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class transcription factor (DUF630 and DUF632) 1,364
Glyma.06G305300 hypothetical protein NA 1,332
Glyma.13G203900 hypothetical protein NA 1,329
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1,324